Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421639_102267 | Not Available | Negative | 1510479 - 1510931 | 17326.2 |
| undecaprenyl-diphosphatase | SAMN05421639_102268 | Not Available | Negative | 1510934 - 1511752 | 30322.9 |
| protein of unknown function | SAMN05421639_102269 | Not Available | Negative | 1511842 - 1512138 | 11224.8 |
| cell division transport system permease protein | SAMN05421639_102270 | Not Available | Negative | 1512141 - 1513040 | 33639.7 |
| 16s rrna (adenine1518-n6/adenine1519-n6)-dimethyltransferase | SAMN05421639_102271 | Not Available | Positive | 1513132 - 1513902 | 29388.5 |
| gliding motility-associated c-terminal domain-containing protein | SAMN05421639_102272 | Not Available | Negative | 1513969 - 1516350 | 85653.9 |
| gliding motility-associated c-terminal domain-containing protein | SAMN05421639_102273 | Not Available | Negative | 1516459 - 1520058 | 125023.0 |
| gliding motility-associated c-terminal domain-containing protein | SAMN05421639_102274 | Not Available | Negative | 1520230 - 1522593 | 84854.6 |
| uncharacterized membrane protein | SAMN05421639_102275 | Not Available | Negative | 1522827 - 1523375 | 21174.9 |
| tigr02757 family protein | SAMN05421639_102276 | Not Available | Negative | 1523387 - 1524157 | 29972.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
