Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | SAMN05421639_102247 | Not Available | Negative | 1488701 - 1490125 | 52464.2 |
| hypothetical protein | SAMN05421639_102248 | Not Available | Negative | 1490194 - 1490673 | 19041.9 |
| hypothetical protein | SAMN05421639_102249 | Not Available | Negative | 1490648 - 1490851 | 8032.12 |
| hypothetical protein | SAMN05421639_102250 | Not Available | Negative | 1490885 - 1491130 | 9585.58 |
| isxo2-like transposase domain-containing protein | SAMN05421639_102251 | Not Available | Negative | 1491121 - 1492047 | 36376.8 |
| hypothetical protein | SAMN05421639_102252 | Not Available | Negative | 1492126 - 1492563 | 16290.1 |
| hypothetical protein | SAMN05421639_102253 | Not Available | Positive | 1492881 - 1493174 | 11345.7 |
| hypothetical protein | SAMN05421639_102254 | Not Available | Negative | 1493171 - 1493368 | 7819.29 |
| ssu ribosomal protein s1p | SAMN05421639_102255 | Not Available | Negative | 1493635 - 1495425 | 66712.0 |
| type iii restriction enzyme | SAMN05421639_102256 | Not Available | Negative | 1495585 - 1498158 | 100574.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
