Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421639_102207 | Not Available | Positive | 1440862 - 1441290 | 17599.7 |
| hypothetical protein | SAMN05421639_102208 | Not Available | Positive | 1441351 - 1441491 | 5561.86 |
| hypothetical protein | SAMN05421639_102209 | Not Available | Positive | 1441760 - 1441867 | 4399.44 |
| hypothetical protein | SAMN05421639_102210 | Not Available | Positive | 1441831 - 1442043 | 7881.52 |
| hypothetical protein | SAMN05421639_102211 | Not Available | Positive | 1442144 - 1442782 | 25065.0 |
| uncharacterized conserved protein yegj, duf2314 family | SAMN05421639_102212 | Not Available | Positive | 1442939 - 1443757 | 31136.7 |
| hypothetical protein | SAMN05421639_102213 | Not Available | Positive | 1444459 - 1444659 | 6945.19 |
| hypothetical protein | SAMN05421639_102214 | Not Available | Positive | 1444726 - 1445205 | 17753.9 |
| protein involved in gliding motility gldg | SAMN05421639_102215 | Not Available | Negative | 1445284 - 1446954 | 63034.2 |
| protein involved in gliding motility gldf | SAMN05421639_102216 | Not Available | Negative | 1446959 - 1447687 | 27013.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
