Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein zapa | SAMN05421639_102147 | Not Available | Negative | 1384372 - 1384659 | 10793.0 |
| hypothetical protein | SAMN05421639_102148 | Not Available | Negative | 1384659 - 1384961 | 11896.2 |
| probable protein-translocating porin port | SAMN05421639_102149 | Not Available | Negative | 1385101 - 1385883 | 30021.6 |
| demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | SAMN05421639_102150 | Not Available | Negative | 1385887 - 1386618 | 27497.7 |
| hypothetical protein | SAMN05421639_102151 | Not Available | Negative | 1386622 - 1387191 | 22285.6 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN05421639_102152 | Not Available | Positive | 1387293 - 1388360 | 39592.5 |
| hypothetical protein | SAMN05421639_102153 | Not Available | Positive | 1388428 - 1389633 | 46050.1 |
| hypothetical protein | SAMN05421639_102154 | Not Available | Negative | 1389634 - 1389786 | 5751.99 |
| hypothetical protein | SAMN05421639_102155 | Not Available | Negative | 1389951 - 1390703 | 29546.6 |
| nucleoside-diphosphate-sugar epimerase | SAMN05421639_102156 | Not Available | Negative | 1390788 - 1391753 | 36101.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
