Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative esterase | SAMN05421639_10286 | Not Available | Positive | 1315292 - 1316968 | 65585.9 |
| predicted amidohydrolase | SAMN05421639_10287 | Not Available | Negative | 1317024 - 1318532 | 57913.6 |
| gmp synthase (glutamine-hydrolysing) | SAMN05421639_10288 | Not Available | Negative | 1318950 - 1320479 | 56770.1 |
| phosphoribosylamine--glycine ligase | SAMN05421639_10289 | Not Available | Negative | 1320649 - 1321887 | 45459.6 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase / imp cyclohydrolase | SAMN05421639_10290 | Not Available | Negative | 1321976 - 1323493 | 56319.4 |
| formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase | SAMN05421639_10291 | Not Available | Negative | 1323797 - 1324363 | 20743.0 |
| phosphoribosylformylglycinamidine cyclo-ligase | SAMN05421639_10292 | Not Available | Negative | 1324448 - 1325440 | 35668.0 |
| nad(p)h-dependent fmn reductase | SAMN05421639_10293 | Not Available | Negative | 1325749 - 1326300 | 20136.9 |
| hypothetical protein | SAMN05421639_10294 | Not Available | Negative | 1326389 - 1327117 | 27429.5 |
| transcriptional regulator, hxlr family | SAMN05421639_10295 | Not Available | Negative | 1327507 - 1327857 | 13303.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
