Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421639_101107 | Not Available | Positive | 103869 - 104171 | 11800.3 |
| hypothetical protein | SAMN05421639_101108 | Not Available | Positive | 104186 - 104572 | 15026.8 |
| catalase | SAMN05421639_101109 | Not Available | Positive | 104631 - 106766 | 79957.4 |
| amidohydrolase, pncc family | SAMN05421639_101110 | Not Available | Positive | 106810 - 107310 | 18770.9 |
| hypothetical protein | SAMN05421639_101111 | Not Available | Positive | 107395 - 108051 | 24979.1 |
| nad(p)h dehydrogenase (quinone) | SAMN05421639_101112 | Not Available | Positive | 108561 - 109649 | 38649.5 |
| hypothetical protein | SAMN05421639_101113 | Not Available | Negative | 109630 - 109812 | 7055.94 |
| gntr family transcriptional regulator / mocr family aminotransferase | SAMN05421639_101114 | Not Available | Negative | 109845 - 111290 | 54970.6 |
| cupin domain-containing protein | SAMN05421639_101115 | Not Available | Positive | 111394 - 111849 | 17491.3 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05421639_101116 | Not Available | Positive | 112043 - 112927 | 32341.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
