Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylornithine deacetylase | SAMN05421639_10226 | Not Available | Negative | 1247911 - 1248993 | 40303.1 |
| n-acetylglutamate kinase | SAMN05421639_10227 | Not Available | Negative | 1248968 - 1249762 | 29175.7 |
| n-succinyl-l-ornithine transcarbamylase | SAMN05421639_10228 | Not Available | Negative | 1249894 - 1250853 | 36077.0 |
| acetylornithine aminotransferase | SAMN05421639_10229 | Not Available | Negative | 1251071 - 1252210 | 41933.0 |
| n-acetyl-gamma-glutamyl-phosphate reductase | SAMN05421639_10230 | Not Available | Negative | 1252539 - 1253501 | 35305.0 |
| argininosuccinate synthase | SAMN05421639_10231 | Not Available | Negative | 1253663 - 1254856 | 44484.6 |
| acetyltransferase (gnat) family protein | SAMN05421639_10232 | Not Available | Negative | 1254825 - 1255430 | 22773.0 |
| putative atpase subunit of terminase (gpp-like) | SAMN05421639_10233 | Not Available | Positive | 1255591 - 1256007 | 16407.2 |
| short chain amide porin | SAMN05421639_10234 | Not Available | Positive | 1256335 - 1257714 | 50384.8 |
| predicted arabinose efflux permease, mfs family | SAMN05421639_10235 | Not Available | Positive | 1257766 - 1259346 | 58749.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
