Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome p450 | SAMN05421639_1011101 | Not Available | Positive | 1196936 - 1198270 | 51800.2 |
| transcriptional regulator, padr family | SAMN05421639_1011102 | Not Available | Positive | 1198486 - 1198815 | 12672.4 |
| phage shock protein c (pspc) family protein | SAMN05421639_1011103 | Not Available | Positive | 1198827 - 1200545 | 64536.9 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN05421639_1011104 | Not Available | Positive | 1200856 - 1201458 | 22556.7 |
| uncharacterized domain 1-containing protein | SAMN05421639_1011105 | Not Available | Positive | 1201538 - 1201969 | 15787.0 |
| isochorismate synthase | SAMN05421639_1011106 | Not Available | Positive | 1202367 - 1203332 | 37496.2 |
| hypothetical protein | SAMN05421639_1011107 | Not Available | Negative | 1203752 - 1203946 | 7415.33 |
| multiple antibiotic resistance protein | SAMN05421639_1011108 | Not Available | Negative | 1203952 - 1204554 | 21729.5 |
| oxygen tolerance | SAMN05421639_1011109 | Not Available | Negative | 1204599 - 1206338 | 65369.5 |
| tetratricopeptide repeat-containing protein | SAMN05421639_1011110 | Not Available | Negative | 1206338 - 1207087 | 28422.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
