Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-grasp ribosomal peptide maturase, mvdd family | SAMN05421639_1011080 | Not Available | Negative | 1180977 - 1181981 | 38382.9 |
| rimk-like atp-grasp domain-containing protein | SAMN05421639_1011081 | Not Available | Negative | 1181974 - 1182930 | 36904.1 |
| serine endopeptidase inhibitors | SAMN05421639_1011082 | Not Available | Negative | 1183022 - 1183249 | 8281.79 |
| serine endopeptidase inhibitors | SAMN05421639_1011083 | Not Available | Negative | 1183294 - 1183533 | 8643.1 |
| serine endopeptidase inhibitors | SAMN05421639_1011084 | Not Available | Negative | 1183574 - 1183819 | 8889.59 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421639_1011085 | Not Available | Negative | 1183936 - 1184715 | 29357.1 |
| pyridoxine 5'-phosphate synthase | SAMN05421639_1011086 | Not Available | Negative | 1184837 - 1185559 | 26698.7 |
| miniconductance mechanosensitive channel | SAMN05421639_1011087 | Not Available | Negative | 1185699 - 1186967 | 48202.8 |
| hypothetical protein | SAMN05421639_1011088 | Not Available | Positive | 1187090 - 1187581 | 17540.5 |
| hypothetical protein | SAMN05421639_1011089 | Not Available | Positive | 1187591 - 1188100 | 18278.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
