Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gscfa family protein | SAMN05421639_1011070 | Not Available | Negative | 1169266 - 1170222 | 37476.6 |
| geranylgeranyl diphosphate synthase, type ii | SAMN05421639_1011071 | Not Available | Negative | 1170307 - 1171278 | 37398.1 |
| inorganic phosphate transporter, pit family | SAMN05421639_1011072 | Not Available | Negative | 1171382 - 1172524 | 41507.6 |
| hypothetical protein | SAMN05421639_1011073 | Not Available | Negative | 1172539 - 1173177 | 24341.1 |
| atp-dependent rna helicase dead | SAMN05421639_1011074 | Not Available | Negative | 1173328 - 1175052 | 65967.0 |
| tigr02453 family protein | SAMN05421639_1011075 | Not Available | Positive | 1175679 - 1176350 | 26037.5 |
| diphosphomevalonate decarboxylase | SAMN05421639_1011076 | Not Available | Negative | 1176480 - 1177538 | 40012.9 |
| long-chain acyl-coa synthetase | SAMN05421639_1011077 | Not Available | Negative | 1177719 - 1179488 | 66708.4 |
| nucleoside-diphosphate-sugar epimerase | SAMN05421639_1011078 | Not Available | Negative | 1179485 - 1180498 | 37821.2 |
| hypothetical protein | SAMN05421639_1011079 | Not Available | Positive | 1180776 - 1180961 | 7246.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
