Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421639_1011000 | Not Available | Positive | 1098440 - 1098649 | 7622.11 |
| hypothetical protein | SAMN05421639_1011001 | Not Available | Negative | 1098755 - 1099648 | 30532.8 |
| helix-turn-helix domain-containing protein | SAMN05421639_1011002 | Not Available | Negative | 1099913 - 1101541 | 62015.0 |
| thioredoxin | SAMN05421639_1011003 | Not Available | Positive | 1101832 - 1102992 | 44080.4 |
| hypothetical protein | SAMN05421639_1011004 | Not Available | Negative | 1103068 - 1103910 | 30259.6 |
| hypothetical protein | SAMN05421639_1011005 | Not Available | Negative | 1103910 - 1104647 | 25744.8 |
| hypothetical protein | SAMN05421639_1011006 | Not Available | Negative | 1104750 - 1105493 | 26315.1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN05421639_1011007 | Not Available | Negative | 1105904 - 1106926 | 37622.6 |
| magnesium transporter | SAMN05421639_1011008 | Not Available | Positive | 1107000 - 1107899 | 34717.3 |
| nte family protein | SAMN05421639_1011009 | Not Available | Positive | 1108025 - 1109656 | 62371.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
