Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Natronincolaceae
Genus
Alkaliphilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Natronincolaceae |
| Genus | Alkaliphilus |
| Species | Alkaliphilus metalliredigens |
| Strain | QYMF |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 35 |
| Temperature range | Mesophilic |
| Habitat | Ponds |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1558517 bp
Thymine Count
1555883 bp
Guanine Count
912968 bp
Cytosine Count
902198 bp
Genome Length
4929566 bp
Protein-coding Genes
4729 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated helicase/endonuclease cas3 | AMET_RS08220 | Not Available | Positive | 1754576 - 1756972 | 90522.2 |
| type i-c crispr-associated protein cas5c | AMET_RS08225 | Not Available | Positive | 1756987 - 1757739 | 28973.2 |
| type i-c crispr-associated protein cas8c/csd1 | AMET_RS08230 | Not Available | Positive | 1757723 - 1759678 | 74335.8 |
| type i-c crispr-associated protein cas7/csd2 | AMET_RS08235 | D4GQN6 | Positive | 1759694 - 1760554 | 32093.8 |
| crispr-associated protein cas4 | AMET_RS08240 | Not Available | Positive | 1760541 - 1761209 | 25866.4 |
| type i-c crispr-associated endonuclease cas1c | AMET_RS08245 | Q8KDC4 | Positive | 1761206 - 1762237 | 39311.5 |
| crispr-associated endonuclease cas2 | AMET_RS08250 | Q9KFX8 | Positive | 1762246 - 1762536 | 11107.5 |
| flavodoxin family protein | AMET_RS08255 | Not Available | Negative | 1764000 - 1765043 | 38859.2 |
| lactate/malate family dehydrogenase | AMET_RS08260 | Not Available | Negative | 1765040 - 1766284 | 46963.7 |
| cytidyltransferase | AMET_RS08265 | Not Available | Negative | 1766303 - 1771198 | 190306.0 |
Pathways
902 pathways
Health Effects
No health effects information available for this bacterium.
