Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Transposase of is904h | SAMN05444374_1161 | Not Available | Positive | 3539018 - 3539311 | 11318.1 |
| Attl | Not Available | Not Available | Positive | 3539431 - 3539442 | Not Available |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN05444374_1162 | Not Available | Negative | 3539708 - 3540694 | 35979.7 |
| cytochrome p450 pkss | SAMN05444374_1163 | Not Available | Negative | 3540753 - 3541979 | 45743.4 |
| polyketide cyclase / dehydrase and lipid transport | SAMN05444374_1164 | Not Available | Negative | 3542046 - 3542513 | 16773.1 |
| acyl-coa dehydrogenase | SAMN05444374_1165 | Not Available | Positive | 3542661 - 3543881 | 43189.2 |
| transcriptional regulator, tetr family | SAMN05444374_1166 | Not Available | Positive | 3543942 - 3544637 | 24520.2 |
| Integrase | SAMN05444374_1167 | Not Available | Positive | 3544986 - 3545819 | 30949.4 |
| Dna binding domain protein | SAMN05444374_1168 | Not Available | Positive | 3545879 - 3546412 | 18458.6 |
| protein of unknown function | SAMN05444374_1169 | Not Available | Positive | 3546409 - 3546942 | 17556.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.