Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-pro | Not Available | Not Available | Positive | 945301 - 945374 | Not Available |
| uncharacterized membrane protein ygcg, contains a tpm-fold domain | SAMN05444374_10350 | Not Available | Positive | 945475 - 947007 | 52333.8 |
| f420-dependent oxidoreductase, g6pdh family | SAMN05444374_10351 | Not Available | Negative | 947036 - 948025 | 36166.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444374_10352 | Not Available | Negative | 948059 - 948859 | 28288.5 |
| glucoamylase (glucan-1,4-alpha-glucosidase), gh15 family | SAMN05444374_10353 | Not Available | Negative | 948885 - 950678 | 65657.0 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)e | SAMN05444374_10354 | Not Available | Negative | 950675 - 951346 | 24170.3 |
| hypothetical protein | SAMN05444374_10355 | Not Available | Negative | 951578 - 951772 | 6196.25 |
| catalase | SAMN05444374_10356 | Not Available | Negative | 951940 - 953463 | 56790.9 |
| cholesterol oxidase | SAMN05444374_10357 | Not Available | Negative | 953605 - 955311 | 60944.1 |
| predicted flavoprotein czco associated with the cation diffusion facilitator czcd | SAMN05444374_10358 | Not Available | Negative | 955308 - 956849 | 57016.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.