Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thif family protein | SAMN05444374_10329 | Not Available | Negative | 927533 - 928573 | 37079.2 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05444374_10330 | Not Available | Negative | 928629 - 929747 | 38978.5 |
| colicin v production protein | SAMN05444374_10331 | Not Available | Negative | 929898 - 931094 | 40190.6 |
| nudix domain-containing protein | SAMN05444374_10332 | Not Available | Negative | 931091 - 931771 | 23605.9 |
| thiol-disulfide isomerase or thioredoxin | SAMN05444374_10333 | Not Available | Negative | 931768 - 932436 | 22707.9 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | SAMN05444374_10334 | Not Available | Negative | 932433 - 933170 | 27256.8 |
| hypothetical protein | SAMN05444374_10335 | Not Available | Positive | 933327 - 933599 | 10077.2 |
| transcriptional regulator /transcriptional regulator, crp/fnr family | SAMN05444374_10336 | Not Available | Positive | 933727 - 934401 | 24764.8 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05444374_10337 | Not Available | Negative | 934470 - 935252 | 27486.8 |
| predicted dehydrogenase | SAMN05444374_10338 | Not Available | Positive | 935321 - 936196 | 30701.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.