Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had-superfamily subfamily ib hydrolase, tigr01490 | SAMN05444374_10319 | Not Available | Positive | 914792 - 915595 | 28697.0 |
| hypothetical protein | SAMN05444374_10320 | Not Available | Negative | 915993 - 916742 | 25402.1 |
| peptide/nickel transport system atp-binding protein | SAMN05444374_10321 | Not Available | Negative | 916752 - 918443 | 61047.2 |
| oligopeptide transport system permease protein | SAMN05444374_10322 | Not Available | Negative | 918446 - 919372 | 32927.6 |
| oligopeptide transport system permease protein | SAMN05444374_10323 | Not Available | Negative | 919378 - 920301 | 33344.5 |
| oligopeptide transport system substrate-binding protein | SAMN05444374_10324 | Not Available | Negative | 920407 - 922023 | 58616.6 |
| acetyl-coenzyme a synthetase | SAMN05444374_10325 | Not Available | Positive | 922422 - 924401 | 72233.2 |
| metabolite-proton symporter | SAMN05444374_10326 | Not Available | Negative | 924488 - 925876 | 49455.1 |
| putative holin-x, holin superfamily iii | SAMN05444374_10327 | Not Available | Positive | 926096 - 926617 | 18581.8 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444374_10328 | Not Available | Positive | 926683 - 927570 | 32848.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.