Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase domain-containing protein | SAMN05444374_1038 | Not Available | Positive | 905483 - 907819 | 82926.9 |
| hypothetical protein | SAMN05444374_1039 | Not Available | Negative | 907816 - 909153 | 48158.9 |
| protein of unknown function | SAMN05444374_10310 | Not Available | Positive | 909245 - 909856 | 20933.6 |
| helicase/secretion neighborhood tade-like protein | SAMN05444374_10311 | Not Available | Negative | 909922 - 910269 | 11563.0 |
| hypothetical protein | SAMN05444374_10312 | Not Available | Negative | 910266 - 910577 | 10489.7 |
| protein of unknown function | SAMN05444374_10313 | Not Available | Negative | 910595 - 910792 | 6785.19 |
| type ii secretion system protein f (gspf) | SAMN05444374_10314 | Not Available | Negative | 910850 - 911416 | 18494.3 |
| tight adherence protein b | SAMN05444374_10315 | Not Available | Negative | 911413 - 912198 | 26507.6 |
| pilus assembly protein cpaf | SAMN05444374_10316 | Not Available | Negative | 912195 - 913373 | 40929.1 |
| helicase/secretion neighborhood cpae-like protein | SAMN05444374_10317 | Not Available | Negative | 913370 - 914587 | 41118.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.