Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| indole-3-glycerol phosphate synthase | SAMN05444374_102387 | Not Available | Positive | 885035 - 885844 | 27873.3 |
| tryptophan synthase, beta chain | SAMN05444374_102388 | Not Available | Positive | 885928 - 887166 | 43580.7 |
| tryptophan synthase, alpha chain | SAMN05444374_102389 | Not Available | Positive | 887163 - 887996 | 28160.2 |
| prolipoprotein diacylglyceryl transferase | SAMN05444374_102390 | Not Available | Positive | 887993 - 889051 | 37621.3 |
| tm2 domain-containing membrane protein yozv | SAMN05444374_102391 | Not Available | Positive | 889048 - 889701 | 23349.5 |
| pyruvate kinase | SAMN05444374_102392 | Not Available | Positive | 889827 - 891245 | 51030.3 |
| acyl-coa thioesterase-2 | SAMN05444374_102393 | Not Available | Positive | 891246 - 892160 | 33733.8 |
| hypothetical protein | SAMN05444374_102394 | Not Available | Negative | 892135 - 892392 | 8745.41 |
| helix-turn-helix | SAMN05444374_102395 | Not Available | Positive | 892525 - 892968 | 15528.9 |
| protein of unknown function | SAMN05444374_102396 | Not Available | Positive | 893008 - 893454 | 16462.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.