Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase | SAMN05444374_1015 | Not Available | Negative | 3882 - 4547 | 23664.3 |
| ribosomal protein s18 acetylase rimi | SAMN05444374_1016 | Not Available | Negative | 4544 - 5053 | 18272.8 |
| thiamine-phosphate kinase | SAMN05444374_1017 | Not Available | Negative | 5038 - 6033 | 33268.8 |
| protein of unknown function | SAMN05444374_1018 | Not Available | Positive | 6196 - 6750 | 18914.3 |
| d-alanine-d-alanine ligase | SAMN05444374_1019 | Not Available | Negative | 6747 - 7814 | 38058.1 |
| glycerol 3-phosphate dehydrogenase (nad(p)+) | SAMN05444374_10110 | Not Available | Negative | 7855 - 8853 | 34073.8 |
| 2-phospho-l-lactate guanylyltransferase | SAMN05444374_10111 | Not Available | Positive | 8998 - 9732 | 24477.8 |
| polyphosphate kinase | SAMN05444374_10112 | Not Available | Positive | 9769 - 11985 | 82146.6 |
| 8-oxo-dgtp diphosphatase | SAMN05444374_10113 | Not Available | Positive | 11997 - 12911 | 33412.5 |
| dna-binding protein hu-beta | SAMN05444374_10114 | Not Available | Negative | 13002 - 13745 | 24978.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.