Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fatty acid desaturase | SAMN05444374_102287 | Not Available | Positive | 769882 - 771147 | 48023.8 |
| linoleoyl-coa desaturase | SAMN05444374_102288 | Not Available | Positive | 771230 - 772483 | 46962.9 |
| ribosome biogenesis gtpase | SAMN05444374_102289 | Not Available | Negative | 772514 - 773398 | 30714.9 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN05444374_102290 | Not Available | Negative | 773500 - 774801 | 44824.2 |
| cys-trna(pro)/cys-trna(cys) deacylase | SAMN05444374_102291 | Not Available | Negative | 774828 - 775358 | 17716.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444374_102292 | Not Available | Positive | 775525 - 776373 | 31070.4 |
| mycothiol system anti-sigma-r factor | SAMN05444374_102293 | Not Available | Positive | 776370 - 776705 | 12451.5 |
| biotin-requiring enzyme | SAMN05444374_102294 | Not Available | Positive | 776969 - 777184 | 7309.89 |
| two-component sensor histidine kinase, contains hiska and hatpase domains | SAMN05444374_102295 | Not Available | Positive | 777203 - 778693 | 52611.7 |
| transcription factor whib | SAMN05444374_102296 | Not Available | Negative | 778809 - 779063 | 9271.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.