Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| whib family transcriptional regulator, redox-sensing transcriptional regulator | SAMN05444374_102267 | Not Available | Positive | 745497 - 745946 | 16198.8 |
| zinicin-like metallopeptidase | SAMN05444374_102268 | Not Available | Negative | 746009 - 746428 | 15434.6 |
| protein of unknown function | SAMN05444374_102269 | Not Available | Positive | 746665 - 747036 | 12845.9 |
| phosphomannomutase | SAMN05444374_102270 | Not Available | Positive | 747255 - 748622 | 48075.6 |
| hypothetical protein | SAMN05444374_102271 | Not Available | Positive | 748701 - 749885 | 39521.9 |
| mannose-6-phosphate isomerase, type 1 | SAMN05444374_102272 | Not Available | Positive | 749959 - 751209 | 45019.6 |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN05444374_102273 | Not Available | Positive | 751360 - 752868 | 52934.3 |
| alkane 1-monooxygenase | SAMN05444374_102274 | Not Available | Positive | 753077 - 754249 | 43805.0 |
| adenosylhomocysteinase | SAMN05444374_102275 | Not Available | Positive | 754309 - 755838 | 55229.5 |
| thymidylate kinase | SAMN05444374_102276 | Not Available | Positive | 755871 - 756554 | 24554.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.