Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide mutase | SAMN05444374_102257 | Not Available | Positive | 735875 - 736390 | 17635.5 |
| hypothetical protein | SAMN05444374_102258 | Not Available | Positive | 736387 - 736803 | 15313.5 |
| tigr03089 family protein | SAMN05444374_102259 | Not Available | Negative | 736817 - 737533 | 24421.4 |
| transcriptional attenuator, lytr family | SAMN05444374_102260 | Not Available | Negative | 737583 - 739199 | 54719.2 |
| dtdp-4-dehydrorhamnose reductase | SAMN05444374_102261 | Not Available | Positive | 739280 - 740164 | 30080.3 |
| n-acetylglucosaminyl-diphospho-decaprenol l-rhamnosyltransferase | SAMN05444374_102262 | Not Available | Positive | 740175 - 741107 | 33564.5 |
| mannose-1-phosphate guanylyltransferase | SAMN05444374_102263 | Not Available | Positive | 741114 - 742190 | 37426.8 |
| 8-oxo-dgtp pyrophosphatase mutt, nudix family | SAMN05444374_102264 | Not Available | Negative | 742222 - 742788 | 20560.2 |
| coenzyme f420-0 gamma-glutamyl ligase | SAMN05444374_102265 | Not Available | Negative | 742785 - 744125 | 47240.3 |
| lppg:fo 2-phospho-l-lactate transferase | SAMN05444374_102266 | Not Available | Negative | 744122 - 745084 | 33753.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.