Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp:flavonoid glycosyltransferase yjic, ydhe family | SAMN05444374_102247 | Not Available | Positive | 724540 - 725808 | 44708.0 |
| hypothetical protein | SAMN05444374_102248 | Not Available | Positive | 725805 - 727163 | 47817.4 |
| hypothetical protein | SAMN05444374_102249 | Not Available | Positive | 727150 - 728574 | 50286.5 |
| propionyl-coa carboxylase beta chain | SAMN05444374_102250 | Not Available | Negative | 728604 - 730274 | 59509.8 |
| bira family transcriptional regulator, biotin operon repressor / biotin-[acetyl-coa-carboxylase] ligase | SAMN05444374_102251 | Not Available | Positive | 730396 - 731286 | 30435.2 |
| ph domain-containing protein | SAMN05444374_102252 | Not Available | Positive | 731289 - 731828 | 19742.9 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05444374_102253 | Not Available | Positive | 731825 - 732508 | 24847.1 |
| signal transduction histidine kinase | SAMN05444374_102254 | Not Available | Positive | 732513 - 733817 | 46482.4 |
| putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose) | SAMN05444374_102255 | Not Available | Negative | 733909 - 734505 | 22022.6 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | SAMN05444374_102256 | Not Available | Positive | 734608 - 735882 | 45590.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.