Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease-8 | SAMN05444374_102227 | Not Available | Negative | 701379 - 702173 | 29308.1 |
| atp dependent helicase, lhr family | SAMN05444374_102228 | Not Available | Negative | 702174 - 706751 | 163941.0 |
| hypothetical protein | SAMN05444374_102229 | Not Available | Negative | 706773 - 707324 | 19856.1 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN05444374_102230 | Not Available | Positive | 707457 - 708623 | 41709.7 |
| hypothetical protein | SAMN05444374_102231 | Not Available | Positive | 708649 - 709359 | 25339.9 |
| transcriptional regulator, asnc family | SAMN05444374_102232 | Not Available | Positive | 709356 - 709802 | 15928.0 |
| methyltransferase domain-containing protein | SAMN05444374_102233 | Not Available | Positive | 709843 - 710358 | 19069.4 |
| 2-haloacid dehalogenase | SAMN05444374_102234 | Not Available | Negative | 710340 - 711062 | 26363.3 |
| protein of unknown function | SAMN05444374_102235 | Not Available | Negative | 711059 - 711463 | 13966.6 |
| biotin carboxyl carrier protein /biotin carboxylase | SAMN05444374_102236 | Not Available | Negative | 711508 - 713304 | 62684.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.