Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtra-like protein | SAMN05444374_102197 | Not Available | Negative | 668926 - 670239 | 46739.7 |
| two component transcriptional regulator, winged helix family | SAMN05444374_102198 | Not Available | Positive | 670339 - 671073 | 27196.9 |
| two-component system, ompr family, sensor kinase | SAMN05444374_102199 | Not Available | Positive | 671070 - 672503 | 49963.5 |
| transcriptional regulator, tetr family | SAMN05444374_102200 | Not Available | Negative | 672791 - 673468 | 23571.6 |
| predicted arabinose efflux permease, mfs family | SAMN05444374_102201 | Not Available | Negative | 673465 - 674640 | 40698.8 |
| hypothetical protein | SAMN05444374_102202 | Not Available | Positive | 674689 - 675030 | 12934.5 |
| msmeg_0572 family protein | SAMN05444374_102203 | Not Available | Positive | 675295 - 675819 | 18627.1 |
| radical sam protein, msmeg_0568 family | SAMN05444374_102204 | Not Available | Positive | 675833 - 676906 | 37539.9 |
| air synthase-related protein, msmeg_0567 c-terminal family | SAMN05444374_102205 | Not Available | Positive | 677276 - 678319 | 35292.1 |
| nitrilase | SAMN05444374_102206 | Not Available | Positive | 678301 - 679203 | 32421.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.