Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase / fumarate reductase iron-sulfur subunit | SAMN05444374_102187 | Not Available | Negative | 657933 - 658715 | 29081.0 |
| succinate dehydrogenase subunit a | SAMN05444374_102188 | Not Available | Negative | 658715 - 660466 | 64609.9 |
| succinate dehydrogenase / fumarate reductase membrane anchor subunit | SAMN05444374_102189 | Not Available | Negative | 660479 - 660940 | 17175.0 |
| succinate dehydrogenase subunit c | SAMN05444374_102190 | Not Available | Negative | 660943 - 661350 | 15392.0 |
| cytidine deaminase | SAMN05444374_102191 | Not Available | Positive | 661603 - 662043 | 15160.8 |
| thymidine phosphorylase | SAMN05444374_102192 | Not Available | Positive | 662036 - 663313 | 44271.1 |
| amino acid abc transporter substrate-binding protein, paat family /amino acid abc transporter membrane protein, paat family | SAMN05444374_102193 | Not Available | Positive | 663310 - 664806 | 52531.8 |
| amino acid abc transporter atp-binding protein, paat family | SAMN05444374_102194 | Not Available | Positive | 664803 - 665573 | 27724.2 |
| adenosine deaminase | SAMN05444374_102195 | Not Available | Positive | 665617 - 666750 | 40766.2 |
| 4-amino-4-deoxy-l-arabinose transferase | SAMN05444374_102196 | Not Available | Negative | 666926 - 668929 | 67740.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.