Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| myo-inositol 2-dehydrogenase / d-chiro-inositol 1-dehydrogenase | SAMN05444374_102167 | Not Available | Negative | 636157 - 637191 | 36673.8 |
| 2-keto-myo-inositol dehydratase | SAMN05444374_102168 | Not Available | Negative | 637221 - 638144 | 34232.4 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase | SAMN05444374_102169 | Not Available | Negative | 638198 - 640147 | 68965.1 |
| 5-deoxyglucuronate isomerase | SAMN05444374_102170 | Not Available | Negative | 640150 - 641058 | 32429.2 |
| fructose-bisphosphate aldolase class ia, dhna family | SAMN05444374_102171 | Not Available | Negative | 641055 - 642002 | 32982.4 |
| 5-dehydro-2-deoxygluconokinase | SAMN05444374_102172 | Not Available | Negative | 641995 - 642993 | 34798.9 |
| transcriptional regulator, gntr family | SAMN05444374_102173 | Not Available | Positive | 643225 - 643977 | 27710.2 |
| predicted dehydrogenase | SAMN05444374_102174 | Not Available | Positive | 644079 - 645239 | 40995.9 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN05444374_102175 | Not Available | Positive | 645370 - 646401 | 34852.6 |
| monosaccharide abc transporter membrane protein, cut2 family | SAMN05444374_102176 | Not Available | Positive | 646466 - 647524 | 37783.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.