Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, hxlr family | SAMN05444374_102116 | Not Available | Positive | 574448 - 574786 | 12506.0 |
| methyltransferase domain-containing protein | SAMN05444374_102117 | Not Available | Positive | 574851 - 575423 | 19592.8 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN05444374_102118 | Not Available | Negative | 575450 - 576316 | 30407.9 |
| hypothetical protein | SAMN05444374_102119 | Not Available | Negative | 576360 - 577280 | 31650.8 |
| conserved protein containing a zn-ribbon-like motif, possibly rna-binding | SAMN05444374_102120 | Not Available | Positive | 577445 - 577996 | 19950.4 |
| transcriptional regulator, tetr family | SAMN05444374_102121 | Not Available | Negative | 578120 - 578749 | 23014.4 |
| prolyl oligopeptidase family protein | SAMN05444374_102122 | Not Available | Positive | 578886 - 580079 | 40885.0 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN05444374_102123 | Not Available | Positive | 580120 - 580383 | 10130.3 |
| hypothetical protein | SAMN05444374_102124 | Not Available | Negative | 580767 - 580997 | 7369.06 |
| hypothetical protein | SAMN05444374_102125 | Not Available | Negative | 581138 - 582082 | 35142.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.