Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444374_102106 | Not Available | Positive | 563454 - 564032 | 19847.1 |
| hypothetical protein | SAMN05444374_102107 | Not Available | Positive | 564068 - 564586 | 18157.4 |
| lsr2 protein | SAMN05444374_102108 | Not Available | Negative | 564715 - 565083 | 13390.4 |
| isocitrate dehydrogenase (nadp) | SAMN05444374_102109 | Not Available | Negative | 566041 - 567294 | 45871.4 |
| putative tricarboxylic transport membrane protein | SAMN05444374_102110 | Not Available | Negative | 567291 - 568796 | 52400.1 |
| putative tricarboxylic transport membrane protein | SAMN05444374_102111 | Not Available | Negative | 568796 - 569350 | 19395.0 |
| universal stress protein family protein | SAMN05444374_102112 | Not Available | Negative | 569340 - 569726 | 13836.2 |
| putative tricarboxylic transport membrane protein | SAMN05444374_102113 | Not Available | Negative | 569763 - 570788 | 35335.5 |
| dna-binding transcriptional regulator, gntr family | SAMN05444374_102114 | Not Available | Negative | 570924 - 571610 | 24916.4 |
| aconitase | SAMN05444374_102115 | Not Available | Positive | 571811 - 574294 | 88119.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.