Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cholesterol oxidase | SAMN05444374_10296 | Not Available | Positive | 552300 - 554081 | 64493.5 |
| gmp synthase (glutamine-hydrolysing) | SAMN05444374_10297 | Not Available | Positive | 554110 - 555720 | 56972.5 |
| hypothetical protein | SAMN05444374_10298 | Not Available | Negative | 555749 - 555910 | 5508.51 |
| phage shock protein c (pspc) family protein | SAMN05444374_10299 | Not Available | Negative | 555903 - 557237 | 45069.9 |
| phage shock protein c (pspc) family protein | SAMN05444374_102100 | Not Available | Positive | 557371 - 558705 | 47032.3 |
| two component transcriptional regulator, luxr family | SAMN05444374_102101 | Not Available | Positive | 558702 - 559361 | 23378.8 |
| uncharacterized conserved protein yafd, endonuclease/exonuclease/phosphatase (eep) superfamily | SAMN05444374_102102 | Not Available | Positive | 559358 - 560305 | 32523.5 |
| non-specific serine/threonine protein kinase | SAMN05444374_102103 | Not Available | Negative | 560315 - 561745 | 50544.1 |
| hypothetical protein | SAMN05444374_102104 | Not Available | Negative | 562035 - 562214 | 5927.85 |
| transglycosylase slt domain-containing protein | SAMN05444374_102105 | Not Available | Positive | 562925 - 563428 | 17011.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.