Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucosamine--fructose-6-phosphate aminotransferase (isomerizing) | SAMN05444374_10276 | Not Available | Positive | 531929 - 533791 | 66939.7 |
| plastocyanin | SAMN05444374_10277 | Not Available | Negative | 533899 - 534270 | 13136.6 |
| yjef c-terminal region, hydroxyethylthiazole kinase-related/yjef n-terminal region | SAMN05444374_10278 | Not Available | Positive | 534303 - 535763 | 48334.0 |
| alanine racemase | SAMN05444374_10279 | Not Available | Positive | 535760 - 536914 | 40000.5 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444374_10280 | Not Available | Positive | 536911 - 537984 | 37854.7 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | SAMN05444374_10281 | Not Available | Positive | 537998 - 538447 | 15782.6 |
| trna threonylcarbamoyl adenosine modification protein yeaz | SAMN05444374_10282 | Not Available | Positive | 538459 - 539142 | 22813.2 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN05444374_10283 | Not Available | Positive | 539139 - 539621 | 16990.9 |
| o-sialoglycoprotein endopeptidase | SAMN05444374_10284 | Not Available | Positive | 539618 - 540664 | 35423.3 |
| hsp70 protein | SAMN05444374_10285 | Not Available | Negative | 540677 - 542266 | 53370.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.