Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna segregation atpase ftsk/spoiiie, s-dna-t family | SAMN05444374_10236 | Not Available | Negative | 493530 - 497528 | 140628.0 |
| type vii secretion integral membrane protein eccd | SAMN05444374_10237 | Not Available | Positive | 497829 - 499235 | 46253.4 |
| membrane-anchored mycosin mycp | SAMN05444374_10238 | Not Available | Positive | 499277 - 500665 | 46584.4 |
| type vii secretion protein eccb | SAMN05444374_10239 | Not Available | Negative | 500623 - 502038 | 48522.3 |
| putative type vii esx secretion system translocon, ecce | SAMN05444374_10240 | Not Available | Positive | 502095 - 503582 | 51176.8 |
| nad(p)h-dependent fmn reductase | SAMN05444374_10241 | Not Available | Negative | 503594 - 504112 | 18345.0 |
| trna pseudouridine38-40 synthase | SAMN05444374_10242 | Not Available | Negative | 504123 - 505022 | 32416.6 |
| lsu ribosomal protein l17p | SAMN05444374_10243 | Not Available | Negative | 505023 - 505616 | 21148.7 |
| dna-directed rna polymerase subunit alpha | SAMN05444374_10244 | Not Available | Negative | 505656 - 506717 | 37942.8 |
| ssu ribosomal protein s4p | SAMN05444374_10245 | Not Available | Negative | 506835 - 507440 | 23680.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.