Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipase_d-nuclease n-terminal | SAMN05444374_101413 | Not Available | Negative | 427792 - 428151 | 13231.2 |
| hypothetical protein | SAMN05444374_101414 | Not Available | Negative | 428243 - 428719 | 16441.4 |
| transcriptional regulator, tetr family | SAMN05444374_101415 | Not Available | Positive | 428905 - 429462 | 19936.7 |
| cytochrome p450 | SAMN05444374_101416 | Not Available | Negative | 429503 - 431962 | 90501.1 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444374_101417 | Not Available | Positive | 432240 - 433208 | 34859.6 |
| membrane protein deda, snare-associated domain | SAMN05444374_101418 | Not Available | Positive | 433205 - 433831 | 22514.9 |
| regulatory protein, luxr family | SAMN05444374_101419 | Not Available | Negative | 433806 - 434261 | 16511.1 |
| dioxygenase | SAMN05444374_101420 | Not Available | Positive | 434764 - 435756 | 33246.2 |
| sec-independent protein translocase protein tata | SAMN05444374_101421 | Not Available | Positive | 435787 - 436011 | 7723.42 |
| sec-independent protein translocase protein tatc | SAMN05444374_101422 | Not Available | Positive | 436008 - 436811 | 28720.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.