Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,4-dienoyl-coa reductase (nadph2) | SAMN05444374_101383 | Not Available | Positive | 398059 - 400089 | 73302.9 |
| hypothetical protein | SAMN05444374_101384 | Not Available | Positive | 400137 - 400943 | 27884.5 |
| hypothetical protein | SAMN05444374_101385 | Not Available | Negative | 400984 - 402561 | 55119.8 |
| oligoribonuclease | SAMN05444374_101386 | Not Available | Positive | 402625 - 403230 | 22234.4 |
| Trna-his | Not Available | Not Available | Positive | 403321 - 403393 | Not Available |
| choline/glycine/proline betaine transport protein | SAMN05444374_101388 | Not Available | Negative | 403445 - 405286 | 65303.1 |
| protein of unknown function | SAMN05444374_101389 | Not Available | Negative | 405426 - 406661 | 43182.4 |
| hypothetical protein | SAMN05444374_101390 | Not Available | Negative | 406797 - 406916 | 4400.47 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN05444374_101391 | Not Available | Positive | 407108 - 407896 | 25815.6 |
| peptidoglycan transpeptidase precursor, erfk-ybis-yhng family | SAMN05444374_101392 | Not Available | Negative | 407917 - 409134 | 42383.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.