Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444374_101373 | Not Available | Positive | 388092 - 388520 | 13899.3 |
| acetyl-coa synthetase | SAMN05444374_101374 | Not Available | Negative | 388517 - 390088 | 55400.0 |
| gaf modulated transcriptional regulator, luxr family | SAMN05444374_101375 | Not Available | Positive | 390185 - 390982 | 27471.1 |
| winged helix dna-binding domain-containing protein | SAMN05444374_101376 | Not Available | Negative | 391015 - 392217 | 43390.0 |
| hypothetical protein | SAMN05444374_101377 | Not Available | Negative | 392345 - 392581 | 8793.4 |
| linoleoyl-coa desaturase | SAMN05444374_101378 | Not Available | Negative | 392593 - 393795 | 45276.3 |
| ferredoxin-nadp reductase | SAMN05444374_101379 | Not Available | Negative | 393822 - 394934 | 39608.9 |
| transcriptional regulator, tetr family | SAMN05444374_101380 | Not Available | Positive | 395128 - 395814 | 25627.0 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444374_101381 | Not Available | Positive | 395825 - 396634 | 29610.8 |
| mfs transporter, umf1 family | SAMN05444374_101382 | Not Available | Negative | 396652 - 397983 | 46601.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.