Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-pro | Not Available | Not Available | Positive | 357544 - 357620 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 357809 - 357879 | Not Available |
| anti-anti-sigma factor | SAMN05444374_101345 | Not Available | Negative | 357970 - 358404 | 14915.7 |
| nucleotide-binding universal stress protein, uspa family | SAMN05444374_101346 | Not Available | Positive | 358732 - 359565 | 28535.5 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN05444374_101347 | Not Available | Positive | 359562 - 360854 | 45172.1 |
| iron-containing redox enzyme | SAMN05444374_101348 | Not Available | Positive | 360864 - 361880 | 36626.2 |
| hypothetical protein | SAMN05444374_101349 | Not Available | Positive | 361948 - 362754 | 27483.7 |
| endonuclease-8 | SAMN05444374_101350 | Not Available | Negative | 362751 - 363545 | 29765.8 |
| ribose 5-phosphate isomerase b | SAMN05444374_101351 | Not Available | Negative | 363580 - 364071 | 17522.5 |
| predicted nuclease (rnase h fold) | SAMN05444374_101352 | Not Available | Positive | 364088 - 364780 | 24085.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.