Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent protein deacetylase, sir2 family | SAMN05444374_101313 | Not Available | Positive | 325010 - 325849 | 30278.9 |
| hypothetical protein | SAMN05444374_101314 | Not Available | Positive | 325846 - 326238 | 12978.1 |
| major facilitator superfamily protein | SAMN05444374_101315 | Not Available | Positive | 326293 - 327033 | 24725.5 |
| protein of unknown function | SAMN05444374_101316 | Not Available | Negative | 327010 - 328338 | 47422.2 |
| glutamate 5-kinase | SAMN05444374_101317 | Not Available | Negative | 328421 - 329524 | 37241.2 |
| gtp-binding protein | SAMN05444374_101318 | Not Available | Negative | 329521 - 330972 | 50855.2 |
| lsu ribosomal protein l27p | SAMN05444374_101319 | Not Available | Negative | 331118 - 331381 | 9097.83 |
| lsu ribosomal protein l21p | SAMN05444374_101320 | Not Available | Negative | 331428 - 331739 | 11092.6 |
| ribonuclease e | SAMN05444374_101321 | Not Available | Negative | 331995 - 335372 | 118061.0 |
| nucleoside diphosphate kinase | SAMN05444374_101322 | Not Available | Negative | 335805 - 336218 | 14571.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.