Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444374_11630 | Not Available | Negative | 3566942 - 3567259 | 10667.8 |
| Head-to-tail connector | SAMN05444374_11631 | Not Available | Negative | 3567278 - 3567544 | 9435.1 |
| Head-to-tail connector protein | SAMN05444374_11632 | Not Available | Negative | 3567550 - 3567909 | 13627.1 |
| Head-to-tail adaptor | SAMN05444374_11633 | Not Available | Negative | 3567906 - 3568316 | 15150.8 |
| Head-to-tail connector protein | SAMN05444374_11634 | Not Available | Negative | 3568340 - 3569020 | 23881.2 |
| Major capsid protein | SAMN05444374_11635 | Not Available | Negative | 3569017 - 3569949 | 33261.7 |
| Scaffolding protein | SAMN05444374_11636 | Not Available | Negative | 3569987 - 3570430 | 14445.4 |
| Capsid maturation protease | SAMN05444374_11637 | Not Available | Negative | 3570430 - 3571689 | 45165.7 |
| Portal protein | SAMN05444374_11638 | Not Available | Negative | 3571686 - 3573050 | 50163.2 |
| Terminase large subunit | SAMN05444374_11639 | Not Available | Negative | 3573065 - 3574582 | 55278.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.