Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, abiei antitoxin, type iv ta system | SAMN05444374_101284 | Not Available | Positive | 293904 - 294782 | 32284.7 |
| gtp-binding protein lepa | SAMN05444374_101285 | Not Available | Negative | 294844 - 296781 | 71513.9 |
| iron complex transport system substrate-binding protein | SAMN05444374_101286 | Not Available | Negative | 296827 - 297855 | 36386.4 |
| pemk-like, mazf-like toxin of type ii toxin-antitoxin system | SAMN05444374_101287 | Not Available | Positive | 297969 - 298526 | 20154.9 |
| transglutaminase-like enzyme, putative cysteine protease | SAMN05444374_101288 | Not Available | Negative | 298554 - 299396 | 30673.6 |
| uncharacterized conserved protein, alpha-e superfamily | SAMN05444374_101289 | Not Available | Negative | 299393 - 300364 | 36058.5 |
| uncharacterized conserved protein, circularly permuted atpgrasp superfamily | SAMN05444374_101290 | Not Available | Negative | 300364 - 302079 | 62042.2 |
| ssu ribosomal protein s20p | SAMN05444374_101291 | Not Available | Positive | 302354 - 302614 | 9452.35 |
| dna polymerase iii, delta subunit | SAMN05444374_101292 | Not Available | Negative | 302730 - 303707 | 33524.0 |
| competence protein comec | SAMN05444374_101293 | Not Available | Negative | 303661 - 305295 | 54241.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.