Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoadenylylsulfate reductase (thioredoxin) | SAMN05444374_101274 | Not Available | Positive | 283156 - 283887 | 26573.2 |
| sulfate adenylyltransferase subunit 2 | SAMN05444374_101275 | Not Available | Positive | 283884 - 284816 | 35233.4 |
| adenylylsulfate kinase /sulfate adenylyltransferase subunit 1 | SAMN05444374_101276 | Not Available | Positive | 284816 - 286531 | 59865.8 |
| hypothetical protein | SAMN05444374_101277 | Not Available | Positive | 286569 - 287168 | 20290.6 |
| sulfate transport system atp-binding protein | SAMN05444374_101278 | Not Available | Negative | 287060 - 288118 | 38037.3 |
| sulfate transport system permease protein | SAMN05444374_101279 | Not Available | Negative | 288124 - 288927 | 28506.7 |
| sulfate transport system permease protein | SAMN05444374_101280 | Not Available | Negative | 288924 - 289823 | 31143.7 |
| sulfate transport system substrate-binding protein | SAMN05444374_101281 | Not Available | Negative | 289826 - 290851 | 35996.7 |
| hypothetical protein | SAMN05444374_101282 | Not Available | Negative | 291214 - 291519 | 10580.8 |
| glucoamylase (glucan-1,4-alpha-glucosidase), gh15 family | SAMN05444374_101283 | Not Available | Positive | 291609 - 293651 | 75698.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.