Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444374_101234 | Not Available | Negative | 237149 - 237652 | 17723.7 |
| cubico group peptidase, beta-lactamase class c family | SAMN05444374_101235 | Not Available | Negative | 237779 - 238624 | 29579.7 |
| anaerobic selenocysteine-containing dehydrogenase | SAMN05444374_101236 | Not Available | Positive | 238700 - 240850 | 78282.0 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05444374_101237 | Not Available | Negative | 240828 - 242669 | 65209.4 |
| pas domain s-box-containing protein | SAMN05444374_101238 | Not Available | Positive | 242851 - 243243 | 13319.5 |
| hypothetical protein | SAMN05444374_101239 | Not Available | Positive | 243258 - 244049 | 28703.8 |
| thif family protein | SAMN05444374_101240 | Not Available | Positive | 244046 - 246160 | 75996.3 |
| diguanylate cyclase/phosphodiesterase with gaf sensor | SAMN05444374_101241 | Not Available | Positive | 246259 - 248088 | 65896.6 |
| Trna-met | Not Available | Not Available | Positive | 248159 - 248232 | Not Available |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05444374_101243 | Not Available | Positive | 248426 - 250675 | 79536.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.