Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | SAMN05444374_101131 | Not Available | Negative | 127615 - 129096 | 50795.3 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | SAMN05444374_101132 | Not Available | Negative | 129093 - 130679 | 54142.9 |
| cell division protein ftsi (penicillin-binding protein 3) | SAMN05444374_101133 | Not Available | Negative | 130828 - 132762 | 67960.8 |
| hypothetical protein | SAMN05444374_101134 | Not Available | Negative | 132759 - 133568 | 26632.4 |
| 16s rrna (cytosine1402-n4)-methyltransferase | SAMN05444374_101135 | Not Available | Negative | 133565 - 134560 | 35954.6 |
| mraz protein | SAMN05444374_101137 | Not Available | Negative | 134779 - 135210 | 15965.7 |
| protein of unknown function | SAMN05444374_101138 | Not Available | Negative | 135746 - 136198 | 15978.3 |
| hypothetical protein | SAMN05444374_101139 | Not Available | Negative | 136363 - 136845 | 16409.2 |
| ribosomal protein s18 acetylase rimi | SAMN05444374_101140 | Not Available | Positive | 137101 - 137778 | 24702.3 |
| phytoene dehydrogenase-related protein | SAMN05444374_101141 | Not Available | Positive | 137775 - 139382 | 56400.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.