Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartyl-trna synthetase | SAMN05444374_105122 | Not Available | Negative | 1667800 - 1669614 | 65666.5 |
| hypothetical protein | SAMN05444374_105123 | Not Available | Positive | 1669761 - 1670678 | 31492.8 |
| hypothetical protein | SAMN05444374_105124 | Not Available | Positive | 1670675 - 1671511 | 30406.8 |
| dna repair photolyase | SAMN05444374_105125 | Not Available | Negative | 1671522 - 1672553 | 38027.9 |
| deoxyribodipyrimidine photo-lyase | SAMN05444374_105126 | Not Available | Positive | 1672663 - 1673922 | 45786.8 |
| protein of unknown function | SAMN05444374_105127 | Not Available | Positive | 1673919 - 1674413 | 16782.8 |
| hypothetical protein | SAMN05444374_105128 | Not Available | Negative | 1674443 - 1675069 | 21496.4 |
| histidyl-trna synthetase | SAMN05444374_105129 | Not Available | Negative | 1675075 - 1676355 | 45697.3 |
| hydroxyacylglutathione hydrolase | SAMN05444374_105130 | Not Available | Negative | 1676408 - 1677079 | 23097.3 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN05444374_105131 | Not Available | Positive | 1677215 - 1678081 | 29544.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.