Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | SAMN05444374_105112 | Not Available | Negative | 1654486 - 1655343 | 28963.1 |
| upf0755 protein | SAMN05444374_105113 | Not Available | Negative | 1655333 - 1656646 | 45942.6 |
| putative holliday junction resolvase | SAMN05444374_105114 | Not Available | Negative | 1656695 - 1657270 | 20120.7 |
| alanyl-trna synthetase | SAMN05444374_105115 | Not Available | Negative | 1657273 - 1659939 | 95398.3 |
| putative atpase | SAMN05444374_105116 | Not Available | Negative | 1659950 - 1661368 | 48777.9 |
| hypothetical protein | SAMN05444374_105117 | Not Available | Negative | 1661353 - 1662552 | 42230.2 |
| transglutaminase-like enzyme, putative cysteine protease | SAMN05444374_105118 | Not Available | Negative | 1662695 - 1663633 | 33779.3 |
| uncharacterized conserved protein, circularly permuted atpgrasp superfamily | SAMN05444374_105119 | Not Available | Negative | 1663630 - 1666077 | 86066.4 |
| acyltransferase | SAMN05444374_105120 | Not Available | Negative | 1666103 - 1666861 | 27280.2 |
| uncharacterized hydrophobic domain-containing protein | SAMN05444374_105121 | Not Available | Negative | 1666871 - 1667791 | 31767.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.