Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate carbamoyltransferase | SAMN05444374_105101 | Not Available | Negative | 1646084 - 1647028 | 33769.6 |
| pyrimidine operon attenuation protein / uracil phosphoribosyltransferase | SAMN05444374_105102 | Not Available | Negative | 1647025 - 1647627 | 21379.4 |
| nusb antitermination factor | SAMN05444374_105104 | Not Available | Negative | 1647728 - 1648312 | 20485.0 |
| translation elongation factor p (ef-p) | SAMN05444374_105105 | Not Available | Negative | 1648313 - 1648876 | 20368.2 |
| xaa-pro dipeptidase | SAMN05444374_105106 | Not Available | Negative | 1648991 - 1650085 | 38709.9 |
| hypothetical protein | SAMN05444374_105107 | Not Available | Positive | 1650168 - 1650713 | 18786.8 |
| 3-dehydroquinate synthase | SAMN05444374_105108 | Not Available | Negative | 1650718 - 1651881 | 40917.1 |
| shikimate kinase | SAMN05444374_105109 | Not Available | Negative | 1651878 - 1652621 | 26208.3 |
| chorismate synthase | SAMN05444374_105110 | Not Available | Negative | 1652618 - 1653814 | 41535.6 |
| type iv leader peptidase family protein | SAMN05444374_105111 | Not Available | Negative | 1653819 - 1654403 | 18643.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.