Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate carboxylase, type 1 | SAMN05444374_10571 | Not Available | Negative | 1611275 - 1614085 | 103551.0 |
| preprotein translocase subunit secg | SAMN05444374_10572 | Not Available | Negative | 1614131 - 1614364 | 8134.3 |
| triosephosphate isomerase | SAMN05444374_10573 | Not Available | Negative | 1614450 - 1615235 | 27003.3 |
| phosphoglycerate kinase | SAMN05444374_10574 | Not Available | Negative | 1615232 - 1616449 | 41841.5 |
| glyceraldehyde 3-phosphate dehydrogenase | SAMN05444374_10575 | Not Available | Negative | 1616454 - 1617473 | 35729.7 |
| hypothetical protein | SAMN05444374_10576 | Not Available | Negative | 1617616 - 1618599 | 34821.8 |
| conserved hypothetical protein, cofd-related | SAMN05444374_10577 | Not Available | Negative | 1618590 - 1619591 | 34514.1 |
| upf0042 nucleotide-binding protein | SAMN05444374_10578 | Not Available | Negative | 1619588 - 1620544 | 34567.1 |
| excinuclease abc subunit c | SAMN05444374_10579 | Not Available | Negative | 1620541 - 1622763 | 79758.0 |
| gamma-glutamyltranspeptidase / glutathione hydrolase | SAMN05444374_10580 | Not Available | Positive | 1622852 - 1624828 | 66982.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.