Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system permease protein | SAMN05444374_10561 | Not Available | Positive | 1600067 - 1600882 | 27848.9 |
| cytochrome c oxidase assembly protein subunit 15 | SAMN05444374_10562 | Not Available | Positive | 1600970 - 1601947 | 34190.6 |
| hypothetical protein | SAMN05444374_10563 | Not Available | Negative | 1601911 - 1602291 | 13106.4 |
| nadph2:quinone reductase | SAMN05444374_10564 | Not Available | Positive | 1602396 - 1603373 | 33815.9 |
| protoheme ix farnesyltransferase | SAMN05444374_10565 | Not Available | Negative | 1603387 - 1604367 | 35021.4 |
| transketolase | SAMN05444374_10566 | Not Available | Positive | 1604588 - 1606687 | 75087.3 |
| transaldolase | SAMN05444374_10567 | Not Available | Positive | 1606694 - 1607812 | 39828.8 |
| glucose-6-phosphate 1-dehydrogenase | SAMN05444374_10568 | Not Available | Positive | 1607816 - 1609375 | 57375.8 |
| glucose-6-phosphate dehydrogenase assembly protein opca | SAMN05444374_10569 | Not Available | Positive | 1609360 - 1610280 | 32795.2 |
| 6-phosphogluconolactonase | SAMN05444374_10570 | Not Available | Positive | 1610273 - 1611001 | 25316.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.