Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aconitate hydratase | SAMN05444374_10541 | Not Available | Positive | 1577562 - 1580366 | 101167.0 |
| transcriptional regulator, tetr family | SAMN05444374_10542 | Not Available | Positive | 1580482 - 1581051 | 21124.2 |
| acetyl-coa c-acetyltransferase | SAMN05444374_10543 | Not Available | Positive | 1581048 - 1582535 | 51411.6 |
| atpase components of abc transporters with duplicated atpase domains | SAMN05444374_10544 | Not Available | Negative | 1582522 - 1584153 | 58609.9 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444374_10545 | Not Available | Positive | 1584254 - 1585024 | 26072.2 |
| lycopene beta-cyclase | SAMN05444374_10546 | Not Available | Positive | 1585027 - 1586160 | 39909.6 |
| dna end-binding protein ku | SAMN05444374_10547 | Not Available | Positive | 1586204 - 1587241 | 37719.1 |
| male sterility protein | SAMN05444374_10548 | Not Available | Positive | 1587404 - 1588651 | 45712.8 |
| hypothetical protein | SAMN05444374_10549 | Not Available | Positive | 1588708 - 1588908 | 7309.01 |
| phosphatidylserine decarboxylase | SAMN05444374_10550 | Not Available | Positive | 1588905 - 1589696 | 28705.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.