Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444374_104277 | Not Available | Positive | 1501194 - 1502213 | 36026.5 |
| formyltetrahydrofolate deformylase | SAMN05444374_104278 | Not Available | Negative | 1502210 - 1503130 | 33406.7 |
| deoxyribose-phosphate aldolase | SAMN05444374_104279 | Not Available | Positive | 1503146 - 1503826 | 22966.6 |
| protein of unknown function | SAMN05444374_104280 | Not Available | Negative | 1503816 - 1504565 | 25547.2 |
| transcriptional regulator, abiei antitoxin, type iv ta system | SAMN05444374_104281 | Not Available | Positive | 1504687 - 1505247 | 20531.2 |
| hypothetical protein | SAMN05444374_104282 | Not Available | Negative | 1505264 - 1506046 | 28543.4 |
| protein of unknown function | SAMN05444374_104283 | Not Available | Negative | 1506050 - 1506553 | 18692.2 |
| protein of unknown function | SAMN05444374_104284 | Not Available | Negative | 1506666 - 1507184 | 18116.4 |
| udp-murnac hydroxylase | SAMN05444374_104285 | Not Available | Negative | 1507219 - 1508769 | 57955.6 |
| udp-n-acetylmuramate dehydrogenase | SAMN05444374_104286 | Not Available | Positive | 1508858 - 1509919 | 37442.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.