Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease i | SAMN05444374_104267 | Not Available | Negative | 1493699 - 1494280 | 19944.0 |
| hypothetical protein | SAMN05444374_104268 | Not Available | Positive | 1494466 - 1494705 | 7600.46 |
| hypothetical protein | SAMN05444374_104269 | Not Available | Positive | 1494754 - 1494939 | 6777.51 |
| transcriptional regulator, tetr family | SAMN05444374_104270 | Not Available | Negative | 1494924 - 1495655 | 26705.4 |
| uncharacterized membrane-anchored protein yjin, duf445 family | SAMN05444374_104271 | Not Available | Positive | 1495797 - 1497053 | 46644.8 |
| transcriptional regulator, contains xre-family hth domain | SAMN05444374_104272 | Not Available | Positive | 1497167 - 1497631 | 16546.2 |
| heparin binding hemagglutinin hbha | SAMN05444374_104273 | Not Available | Positive | 1497633 - 1498451 | 28795.4 |
| protein of unknown function | SAMN05444374_104274 | Not Available | Positive | 1498527 - 1498820 | 10517.3 |
| manganese transport protein | SAMN05444374_104275 | Not Available | Negative | 1498822 - 1500069 | 43011.8 |
| hamp domain-containing protein | SAMN05444374_104276 | Not Available | Positive | 1500165 - 1501178 | 36358.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.